Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGTAACTTTTTTTAATGCAAGCCACGTTGTGTGCCAGA
..((((((((((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138694
GeneSymbolPKHD1
Binding site4842,4882
Score1.0
Seed1
Au0.515
Energy-23.3
Binding len16
Me-4.957
Phylopstem0.7930491785714286
Phylopflank1.3363670749999998
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure