Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGCATTGCTTTCAAGGACATCATGCCCTTCTCTGCCCAGGTG
((((((((..((((((((((((&)))))))))))).........................)))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138697
GeneSymbolTAS1R1
Binding site773,820
Score0.846
Seed1
Au0.441
Energy-20.1
Binding len47
Me-6.236
Phylopstem3.233566
Phylopflank1.157349725
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end8
PositionCDS
2D Structure