Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGAAAGGAGTCAGTGA
(((((((((((((((.......&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138700
GeneSymbolTRIM40
Binding site947,963
Score1.0
Seed1
Au0.529
Energy-25.9
Binding len16
Me-4.171
Phylopstem0.16165778000000008
Phylopflank0.24177782250000002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure