Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCATTTCCTTTGTGGGTACATTGTGTGAAAGGA
.(((..(((((((((((.....&.)))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138701
GeneSymbolMPLKIP
Binding site4506,4542
Score0.923
Seed0
Au0.647
Energy-19.4
Binding len18
Me-9.813
Phylopstem0.13999918181818183
Phylopflank0.11816180250000004
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure