Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCCATGTTGGCCAGGG
.((((((..(((..(((((...&)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138704
GeneSymbolNSMCE3
Binding site4360,4379
Score1.0
Seed1
Au0.529
Energy-19.2
Binding len19
Me-9.309
Phylopstem1.7626273333333333
Phylopflank1.2813025625
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure