Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGCCAGAAGCAGCTGGAGCTGAAAGTGT
(((((((((((((((((((...&)))))))))............))))))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138704
GeneSymbolNSMCE3
Binding site350,385
Score0.923
Seed1
Au0.441
Energy-23.3
Binding len35
Me-3.938
Phylopstem-0.003689058823529424
Phylopflank-0.06618018
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end5
PositionCDS
2D Structure