Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGAAAGGGGAAAAGGGGAGTGG
((((..(((((((((((.(...&).)))))))))))........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138715
GeneSymbolMSR1
Binding site1054,1080
Score0.808
Seed0
Au0.559
Energy-21.5
Binding len26
Me-9.958
Phylopstem0.35016507272727276
Phylopflank-0.13238608750000003
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end4
PositionCDS
2D Structure