Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GGCCAGAAAGGGGAAAAGGGGAGTGG
((((..(((((((((((.(...&).)))))))))))........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138716
GeneSymbolMSR1
Binding site1054,1080
Score0.923
Seed0
Au0.529
Energy-21.5
Binding len26
Me-9.958
Phylopstem0.8972108909090909
Phylopflank1.3345963675000003
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end4
PositionCDS
2D Structure