Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATTGGCCCGGGGGGCCATAGTGA
((((((((((...((((((...&.)))))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138717
GeneSymbolPPT2
Binding site914,940
Score0.846
Seed1
Au0.426
Energy-23.7
Binding len20
Me-11.398
Phylopstem0.11699141666666668
Phylopflank-0.06006271750000001
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure