Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGAAGGCAGAGCTTGCAGTGA
(((((((((((((((((((...&))))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138731
GeneSymbolMIPOL1
Binding site6636,6661
Score0.846
Seed1
Au0.397
Energy-25.9
Binding len25
Me-3.938
Phylopstem-0.3228146166666667
Phylopflank-0.22702576625000012
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure