Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCCTGCCTGGTTGGGCTTCCTGGGGCCAGTGT
((((((((((...((((((((.&.))))))))...........)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138737
GeneSymbolHEPH
Binding site489,526
Score0.923
Seed1
Au0.382
Energy-28.2
Binding len31
Me-11.398
Phylopstem5.1395271000000005
Phylopflank2.5581883249999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure