Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTCTTTACAGAAAATGTATTGGCACATCCTTGCATTGTTCTACGCCGCCAATGTCAGGTT
((((((((((((((((((....&.)))))))))............))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138773
GeneSymbolSLC25A46
Binding site436,500
Score0.846
Seed1
Au0.529
Energy-19.3
Binding len32
Me-3.938
Phylopstem4.243753088333333
Phylopflank4.294951204999999
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end4
PositionCDS
2D Structure