Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGTTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138796
GeneSymbolSPATA17
Binding site2818,2841
Score0.846
Seed1
Au0.471
Energy-26.9
Binding len23
Me-10.109
Phylopstem0.06551027272727274
Phylopflank-0.18220093749999988
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure