Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGACAGATCTGACTATTTTGCTGCATGGGGAGCCAGG
..((((((((((....((((((&.))))))....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138800
GeneSymbolTRIM43
Binding site1104,1143
Score0.923
Seed1
Au0.5
Energy-23.9
Binding len22
Me-8.071
Phylopstem0.36839609999999995
Phylopflank0.05550462024999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure