Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGTTAGAAATGGAGTCAA
...((((((((((((((.(...&).))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138812
GeneSymbolDYDC1
Binding site168,186
Score0.846
Seed0
Au0.559
Energy-17.3
Binding len18
Me-6.515
Phylopstem-0.25080774000000006
Phylopflank0.8448208749999999
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
Position5UTR
2D Structure