Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCAAAGTCCTTTGCCTGGCGCAGTGGCTGCCAGGA
.(((((((..((.(((......&.))).))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_138924
GeneSymbolGAMT
Binding site778,816
Score0.846
Seed1
Au0.441
Energy-17.9
Binding len17
Me-7.381
Phylopstem-0.1559752285714285
Phylopflank-0.062985173125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure