Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGATCCCAGAGGGCGATTGTGCCACTAAGCAAGAATACTGGAGCAATGGCACAGTGA
((((((((((((((((((....&.))))))))...........................))))).......))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138939
GeneSymbolCD200R1
Binding site976,1035
Score0.846
Seed1
Au0.5
Energy-20.6
Binding len54
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings45
Pairings in 3prime end4
Position3UTR
2D Structure