Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACGCAGGAACAGAGGGAGAGTGGGGGGCTGGTGG
((((((((((((((((.((...&)).)))))..............))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138962
GeneSymbolMSI2
Binding site5320,5354
Score0.846
Seed1
Au0.471
Energy-23.1
Binding len34
Me-3.938
Phylopstem0.831873333333333
Phylopflank2.0682145875000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure