Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAAATGGAGCCAGCGG
(.((((((((.((.(((((...&))))))).)))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138969
GeneSymbolSDR16C5
Binding site1384,1403
Score0.846
Seed1
Au0.368
Energy-21.9
Binding len19
Me-8.783
Phylopstem-0.33124422499999995
Phylopflank-0.31904120624999993
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end5
Position3UTR
2D Structure