Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCAAGGCTGAATAGAAGAGATGGAGCTGGTGG
(((((((((((((((.......&.))))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_138994
GeneSymbolCNTNAP4
Binding site141,176
Score1.0
Seed1
Au0.529
Energy-21.9
Binding len18
Me-4.171
Phylopstem4.1906946875
Phylopflank3.8199745637499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure