Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGAGGCAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGCAGTGA
(((((((((((((((((((...&.))))))))))..))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139011
GeneSymbolHFE
Binding site1404,1451
Score0.923
Seed1
Au0.397
Energy-26.4
Binding len26
Me-3.938
Phylopstem-0.1690207916666667
Phylopflank-0.44952898750000003
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure