Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGCTGTGTGTTGAAGTACAGAGGGAGGTTGGGGTGGGTCA
.(((((..(((((((((((((&))))))).......................))))))....))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_139062
GeneSymbolCSNK1D
Binding site3314,3360
Score0.846
Seed0
Au0.5
Energy-27.4
Binding len46
Me-7.651
Phylopstem5.1677368333333344
Phylopflank5.0639383350000005
Longest consecutive pairings7
Position of longest consecutive pairings39
Pairings in 3prime end8
Position3UTR
2D Structure