Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTCAATGATGCCAGGG
.((((((((.((.((.((....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_139067
GeneSymbolSMARCC2
Binding site3288,3304
Score0.923
Seed1
Au0.368
Energy-17.6
Binding len16
Me-6.558
Phylopstem5.017706625000001
Phylopflank4.988046096
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure