Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGATGGGAGCAGGTGA
((((.((((((((((((((...&))))))))..)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139070
GeneSymbolMAPK9
Binding site4013,4035
Score0.949
Seed0
Au0.368
Energy-24.6
Binding len22
Me-8.057
Phylopstem5.2772275
Phylopflank5.89895338875
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure