Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTTCAGAGACCCAGGAGTTGGG
..(((((((((((((((((((.&))))))...))))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139071
GeneSymbolSMARCD1
Binding site1808,1835
Score0.846
Seed1
Au0.441
Energy-22.3
Binding len27
Me-4.957
Phylopstem1.3465853076923078
Phylopflank1.1876791425000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure