Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCAGCACCTGTGTGCCGGGG
.(((((((((((.(((.(((((&))))).)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_139072
GeneSymbolDNER
Binding site1039,1062
Score0.846
Seed1
Au0.456
Energy-22.9
Binding len23
Me-5.082
Phylopstem4.435173727272727
Phylopflank5.3904460575
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure