Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGGATGTGAGAGTA
((((.(((..((((((((....&))))))))..))).)).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047422491
GeneSymbolMTSS1
Binding site3921,3941
Score0.846
Seed0
Au0.647
Energy-18.2
Binding len20
Me-10.356
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure