Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGTGAACGACCCCTTTGTAATGAATGAGTGGGGAGGTAGTGT
(((((.((((((.((((((((.&))))))))...........................)))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139075
GeneSymbolTPCN2
Binding site4059,4107
Score0.962
Seed0
Au0.5
Energy-25.9
Binding len48
Me-7.128
Phylopstem-0.7539969750000001
Phylopflank-0.50908582925
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end7
Position3UTR
2D Structure