Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGGCAGAGGTTGCAGTGAGCCGA
...((((((((((((((((...&)))))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139076
GeneSymbolABRAXAS1
Binding site3472,3502
Score1.0
Seed0
Au0.412
Energy-22.5
Binding len30
Me-6.515
Phylopstem2.206347757241379
Phylopflank2.6732333035000004
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end5
Position3UTR
2D Structure