Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAGGGAGGAGATAGCCCAGTGG
((((((((((((((((((....&)))))))))))).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139078
GeneSymbolMAPKAPK5
Binding site8390,8414
Score0.942
Seed1
Au0.5
Energy-27.3
Binding len24
Me-3.938
Phylopstem-0.4179664608695652
Phylopflank0.5749875275000002
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure