Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGTTGCTCCCATCAGGG
.(((((((.((((((((((...&)))))))))))))......)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_139125
GeneSymbolMASP1
Binding site3833,3857
Score0.846
Seed1
Au0.515
Energy-19.7
Binding len24
Me-4.85
Phylopstem0.5053147600000001
Phylopflank1.7406111624999996
Longest consecutive pairings13
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure