Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCTACCGCAGCTCCAAC
(((.(((((((((.((..(((&))))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047422491
GeneSymbolMTSS1
Binding site1028,1048
Score1.0
Seed0
Au0.368
Energy-21.7
Binding len20
Me-7.826
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure