Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGGCGTGAGGTCTTGCAGGCATCTGTCTT
((((((((((((((((((...&)))))))).........)))))).....)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_139131
GeneSymbolNUP98
Binding site3068,3101
Score0.923
Seed1
Au0.544
Energy-26.0
Binding len33
Me-3.938
Phylopstem3.2459090687500005
Phylopflank4.475186087500001
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end5
Position3UTR
2D Structure