Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGGTGGAGCAGTTAGGGAGGGTTGTGGAACTGGACAGTGA
(((((((((((((((((((...&))))))))).))))).........................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139132
GeneSymbolNUP98
Binding site2932,2978
Score0.923
Seed1
Au0.471
Energy-26.1
Binding len46
Me-3.938
Phylopstem4.7115032888888875
Phylopflank2.5230171625
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end5
PositionCDS
2D Structure