Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGAACCCAGAAGAGGAGACAGTT
.((((.(((((((((((((...&.))))))).)))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139132
GeneSymbolNUP98
Binding site5552,5578
Score0.923
Seed0
Au0.574
Energy-25.8
Binding len21
Me-5.694
Phylopstem4.029953442857143
Phylopflank3.54597055625
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure