Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCAGAAAGGTCACCACCCAGCCCAGTT
.((((((((((((((.(((((.&)))))))))))).........)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139158
GeneSymbolCDK15
Binding site1258,1288
Score0.846
Seed1
Au0.485
Energy-22.1
Binding len30
Me-4.026
Phylopstem0.809677208333333
Phylopflank1.9534190624999999
Longest consecutive pairings12
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure