Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACTCAGGCTGGAGTGCAGTGA
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139168
GeneSymbolSREK1
Binding site5920,5943
Score0.846
Seed1
Au0.456
Energy-23.7
Binding len23
Me-10.109
Phylopstem0.0296735909090909
Phylopflank-0.019903493750000015
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure