Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCTGGGAGGGGGATTATTTAGTGA
((((((((((((((((((....&)))))))))))).....)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139169
GeneSymbolTRUB1
Binding site3168,3192
Score0.846
Seed1
Au0.721
Energy-20.6
Binding len24
Me-3.938
Phylopstem-0.08514206521739127
Phylopflank0.09434639875000003
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure