Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCAAGGCCGAGCCAGCCCAGAGAGGAGCATGTC
.((..((((((((((((((...&.))))))))))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139177
GeneSymbolSLC39A11
Binding site1603,1637
Score0.923
Seed0
Au0.456
Energy-30.1
Binding len20
Me-10.944
Phylopstem0.5957814028571429
Phylopflank2.1493010785
Longest consecutive pairings14
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure