Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATGGGGCGGCCTGCAGACCCTGCCAGGG
.(((((((.....(((((....&.))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_139202
GeneSymbolMLC1
Binding site3044,3074
Score0.846
Seed1
Au0.338
Energy-20.1
Binding len19
Me-13.553
Phylopstem4.017106285714285
Phylopflank3.4931980825
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure