Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCACAGAGGACCAGGTGG
((((((.((((((.((((....&)))).)))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139212
GeneSymbolHOPX
Binding site78,97
Score0.846
Seed0
Au0.382
Energy-20.7
Binding len19
Me-6.338
Phylopstem1.5331608333333333
Phylopflank0.9904036724999997
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure