Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTTGGAAAGAAGCCTGTTGGGCCAGA
..(((((((((((((((((...&)))))))))).........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139212
GeneSymbolHOPX
Binding site802,829
Score0.923
Seed1
Au0.559
Energy-19.8
Binding len27
Me-4.957
Phylopstem4.0807459615384625
Phylopflank3.3686679900000005
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure