Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTAAGTTGTTGCCAGA
..((((((.(((((.((((...&)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_139245
GeneSymbolPPM1L
Binding site4734,4751
Score1.0
Seed1
Au0.647
Energy-18.1
Binding len17
Me-6.749
Phylopstem0.12750616666666664
Phylopflank0.0665669875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure