Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATGTCACCGAGGAGGAGCAGCTGCAGCTGCGGG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047422575
GeneSymbolPIK3CD
Binding site1817,1852
Score1.0
Seed1
Au0.324
Energy-28.4
Binding len18
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure