Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCATAGAGCCAAAGCCAGTC
.(((((((...((((((((((.&))))).)))))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139249
GeneSymbolMS4A6E
Binding site494,517
Score0.838
Seed1
Au0.471
Energy-21.5
Binding len23
Me-8.917
Phylopstem1.3206921000000003
Phylopflank-0.002995620000000032
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure