Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAATGGAAGCTTCCAGTGA
((((((((((.((((((((...&)))))))).))).))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139273
GeneSymbolCARS1
Binding site2287,2311
Score0.846
Seed1
Au0.515
Energy-25.7
Binding len24
Me-6.762
Phylopstem3.0789029285714284
Phylopflank5.009466101249999
Longest consecutive pairings8
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure