Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGCCCTCTGCTGTCTGCTGAGATGCCAGGC
.((((((((.....((((((..&.))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_139278
GeneSymbolLGI3
Binding site3087,3122
Score1.0
Seed1
Au0.412
Energy-21.5
Binding len20
Me-13.353
Phylopstem-0.5493992499999999
Phylopflank-0.28504126250000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure