Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCTAGAATGCCATCCTTCTTCAGGAGCTAGTT
.((((((((((((((((((...&)))).))))..............)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139282
GeneSymbolRHOXF1
Binding site605,639
Score0.846
Seed1
Au0.5
Energy-23.4
Binding len34
Me-3.793
Phylopstem-0.5538007575757576
Phylopflank-0.8331131187499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure