Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAAACCTGGGAAGGAAGGAGTGAAGAACGCCGTGG
(((.(((((((((((((((...&.)))))))))))).............)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_139319
GeneSymbolSLC17A8
Binding site356,394
Score1.0
Seed0
Au0.574
Energy-22.5
Binding len33
Me-6.97
Phylopstem4.097025607142857
Phylopflank2.795264918375
Longest consecutive pairings12
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure