Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGATTTGCAGCCAGGA
.((((((...(((..(((((((&)))))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_139321
GeneSymbolATRN
Binding site5291,5312
Score1.0
Seed1
Au0.647
Energy-17.9
Binding len21
Me-9.998
Phylopstem1.7229700285714284
Phylopflank1.58835523
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure